oggmap
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Pre-calculated orthomaps
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myTAI - Function correspondance
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oggmap
Index
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Index
A
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C
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D
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E
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G
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M
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O
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P
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Q
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R
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S
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U
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W
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Z
A
add_argparse_args() (in module oggmap.eggnog2orthomap)
(in module oggmap.gtf2t2g)
(in module oggmap.ncbitax)
(in module oggmap.of2orthomap)
(in module oggmap.qlin)
add_gene_age2adata_var() (in module oggmap.orthomap2tei)
C
cazet22() (in module oggmap.datasets)
cazet22_orthomap() (in module oggmap.datasets)
D
define_parser() (in module oggmap.eggnog2orthomap)
(in module oggmap.gtf2t2g)
(in module oggmap.ncbitax)
(in module oggmap.of2orthomap)
(in module oggmap.qlin)
E
ensembl105() (in module oggmap.datasets)
ensembl110_last() (in module oggmap.datasets)
G
geneset_overlap() (in module oggmap.orthomap2tei)
get_bins() (in module oggmap.orthomap2tei)
get_continuity_score() (in module oggmap.of2orthomap)
get_counts_per_ps() (in module oggmap.of2orthomap)
get_e50() (in module oggmap.orthomap2tei)
get_eggnog_orthomap() (in module oggmap.eggnog2orthomap)
get_ematrix() (in module oggmap.orthomap2tei)
get_geneset_overlap() (in module oggmap.orthomap2tei)
get_lineage_topo() (in module oggmap.qlin)
get_oldest_common() (in module oggmap.qlin)
get_orthomap() (in module oggmap.of2orthomap)
get_pmatrix() (in module oggmap.orthomap2tei)
get_pstrata() (in module oggmap.orthomap2tei)
get_qlin() (in module oggmap.qlin)
get_rematrix() (in module oggmap.orthomap2tei)
get_tei() (in module oggmap.orthomap2tei)
get_youngest_common() (in module oggmap.qlin)
get_youngest_common_counts() (in module oggmap.of2orthomap)
M
ma21_fst() (in module oggmap.datasets)
main() (in module oggmap.eggnog2orthomap)
(in module oggmap.gtf2t2g)
(in module oggmap.ncbitax)
(in module oggmap.of2orthomap)
(in module oggmap.qlin)
mergeby_from_counts() (in module oggmap.orthomap2tei)
mergeby_from_dataframe() (in module oggmap.orthomap2tei)
module
oggmap.datasets
oggmap.eggnog2orthomap
oggmap.gtf2t2g
oggmap.ncbitax
oggmap.of2orthomap
oggmap.orthomap2tei
oggmap.qlin
mouse_ensembl105_gtf() (in module oggmap.datasets)
mouse_ensembl110_gtf() (in module oggmap.datasets)
mouse_synonyms() (in module oggmap.datasets)
mytai_example() (in module oggmap.datasets)
O
oggmap.datasets
module
oggmap.eggnog2orthomap
module
oggmap.gtf2t2g
module
oggmap.ncbitax
module
oggmap.of2orthomap
module
oggmap.orthomap2tei
module
oggmap.qlin
module
P
packer19() (in module oggmap.datasets)
packer19_small() (in module oggmap.datasets)
parse_gtf() (in module oggmap.gtf2t2g)
Q
qiu22_frog() (in module oggmap.datasets)
qiu22_mouse() (in module oggmap.datasets)
qiu22_zebrafish() (in module oggmap.datasets)
R
read_orthomap() (in module oggmap.orthomap2tei)
replace_by() (in module oggmap.orthomap2tei)
S
sun21_orthomap() (in module oggmap.datasets)
U
update_ncbi() (in module oggmap.ncbitax)
W
ws288() (in module oggmap.datasets)
Z
zebrafish_ensembl105_gtf() (in module oggmap.datasets)
zebrafish_ensembl105_orthomap() (in module oggmap.datasets)
zebrafish_ensembl110_gtf() (in module oggmap.datasets)
zebrafish_ensembl110_orthomap() (in module oggmap.datasets)
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