oggmap
Documentation
Installation
Authors and citations
Contact
License
References
Tutorials
Tutorials
Getting started
Pre-calculated orthomaps
oggmap - Steps
oggmap - Downstream analysis
Case studies
Command line functions
myTAI - Function correspondance
Prerequisites
Code and data availability
Step 4 - TEI calculation
Command line functions
Step 4 - other evolutionary indices
frog embryogenesis - case study
Step 3 - map gene/transcript IDs
Step 2 - gene age class assignment
hydra - case study
mouse - case study
Correspondance of myTAI and oggmap functions
nematode embryogenesis - case study
Step 0 - run OrthoFinder
hematopoiesis - case study
plotting results
some basic concepts of plotting orthomap results
partial TEI values
Step 1 - get taxonomic information
relative expression
zebrafish embryogenesis - case study
API
API
Indices
Changelog
oggmap
Tutorials
plotting results
View page source
plotting results
some basic concepts of plotting orthomap results